CDS

Accession Number TCMCG015C34771
gbkey CDS
Protein Id XP_027068265.1
Location complement(join(4992550..4992876,4993224..4993541,4993674..4994120,4996689..4997076,4997176..4997261,4997447..4997560,4998231..4998459,4998552..4998640))
Gene LOC113693780
GeneID 113693780
Organism Coffea arabica

Protein

Length 665aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027212464.1
Definition mediator of RNA polymerase II transcription subunit 17-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category S
Description RNA polymerase II transcription
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15133        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04919        [VIEW IN KEGG]
map04919        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016592        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACGGAAACCTAGACATTTCCATCGACAAGCTCCCCATCAAACGCTTAGAAGTCATCGAAGAAAATGGCGTCGAGCGATTCCCTTCAGACGTAGGGCACGAGGAGAAACGAGTAGACTTGATAAGGAGAATAGACTTCGCGTGGGCGGTGGAGAGAGAGGAGCCTTCCAGCAAGAAGCAGAAGAAGACTACTACTAGTAGTACTAGTAAGGAAACTCACAACTCCGGTAATCAGCCATGGCAGTGGCAGAGTTTACTGGAGAATCTACAATTAGCTCATCAAGAGCTCTCCGTCATTATCGATCTCATCAACACCCTGGAGGCAAACAATGATGTAACAGTGGCTAGCATGACCAGGCCGAAGCAGTTGCCTAATGAGCTTCTGTCTGACCTTGCTGTATCTACAGCTACCAAGCTACAGTGCTTCCGGCATCTTGGCAGATATTTTAAGCAATCTGCCAAAGCACTGGAGCAGCAGGTAGCTAGAGAAGCAAGATTCTATGGTGCGCTGATTAGATTGCAGCAAAATTGGAAAGTTAAAAGACATCGTGCAGTTGCTGCTGCCTCTGGAAATGAGGGGTTCTACATTGATTTATTTGATAATTCACTAAATGATCCAGCAGCAGCATTTCGTCCATCCTCAGTGTCTACTGTTCGTGTGGAGCATGATTCAGCTGGAATGCTAGCCGTGAATTTGCCTCCAAACTCTTGCCGTACTCTTCAGTTTGAGTTTCTTGGTGCACATTCAAGCTATAATGCAAGAAGATCAAGCAGAACGAAAGTACAAACCTTTATTGCTGATGGTTATGAAGAAACTAAGAAAGAACATCTTAATGATGATAAATGTGTAAGAGAAACGCATGCGCTCCTCCGTGAAGTTCATCTGGCCATTTTTAATGAGCAGGTATTTGAGTTGGTTAATCGTGAAGTATTTAACCCATCTATAGGTGTCAATGTGACTGGGATACAAGAAAACTATTTAAGATTAAGCATTGGTCAAGGAGCGTCTGTATCTGTTTCACTTGTTCCATCTGGTCAAGATGATCAAACAGTCAGCATTACAGGCACTAACAATCTAGAAACTGCAATTATATCTATGGAATCATTTGAAGAAGGGAGACGCAACTTTAAGAAGTCAGCATTTGCAAATCAGATTAGTTTTGAAATATATTTGCAACAACTTTTTCATGAACACGTGTTTGTGAAAGCTAAACGTAGAGCTGCATCTTCAAGTAGAAGTCAGGTACCTGGTCAGCCAGCGAAGGACAGCTTCAATCTTCTGGGTCACTTCTGCTTGTCTCTAGCTCACAGGATCTTCTCAATCAGAGTTCTCACTGAGCTGGAAAATCTGGTGCGTGGAATCCCATATGTCCATTTAATGTCACATCCCACTTGGCATTCTCGGACATCATCTTGGACACTCTCCATCAATATTCCCCAGCCAATTTCACTTGCAGGAAACCAGGCTCAGGTATCTGCCCTGACCCATATCAAGAGCCTAAAGTCTCAGTACTGGACTAAGGTGCTTGTCAATGATGACTGCATTACTGTGGAAGGGGAAGGTGCTCCTAAGGTTGTTGGTCTCTTCAAGGGGAAGTCTGAGACAATTTCTCCTATGAATAGATATAATTGTGAATTGGCAGATCTTCCTTTGATACTCCTACAGCAGGTTGCCAGCCAAGTTATTAGCTGGCTTCACGATGAAGCCCTTACAGTGGGTATTAAAGCAAACAGAGACTTCCTATCCTTGTCATTTGAGTTGGATCAGGGCGAACTACTCAGTCTGGTGTCACACATAGACCCTGAAGATGCTGAAGGGTGCATCTCGTGGTGGTTAGTGATGGAAGATGGATTCACAGAGGAACACAAACTTCGTATGGATATATCTAATAGTGAATCAGAAACCAGGAAGTTCTTGGGACATTTATCTCTGGATGTCCTATATTCTACTGTGTTTGATTTGGTTGGCCTGTGTGGTGGTGGTGGGATGCACTGA
Protein:  
MDGNLDISIDKLPIKRLEVIEENGVERFPSDVGHEEKRVDLIRRIDFAWAVEREEPSSKKQKKTTTSSTSKETHNSGNQPWQWQSLLENLQLAHQELSVIIDLINTLEANNDVTVASMTRPKQLPNELLSDLAVSTATKLQCFRHLGRYFKQSAKALEQQVAREARFYGALIRLQQNWKVKRHRAVAAASGNEGFYIDLFDNSLNDPAAAFRPSSVSTVRVEHDSAGMLAVNLPPNSCRTLQFEFLGAHSSYNARRSSRTKVQTFIADGYEETKKEHLNDDKCVRETHALLREVHLAIFNEQVFELVNREVFNPSIGVNVTGIQENYLRLSIGQGASVSVSLVPSGQDDQTVSITGTNNLETAIISMESFEEGRRNFKKSAFANQISFEIYLQQLFHEHVFVKAKRRAASSSRSQVPGQPAKDSFNLLGHFCLSLAHRIFSIRVLTELENLVRGIPYVHLMSHPTWHSRTSSWTLSINIPQPISLAGNQAQVSALTHIKSLKSQYWTKVLVNDDCITVEGEGAPKVVGLFKGKSETISPMNRYNCELADLPLILLQQVASQVISWLHDEALTVGIKANRDFLSLSFELDQGELLSLVSHIDPEDAEGCISWWLVMEDGFTEEHKLRMDISNSESETRKFLGHLSLDVLYSTVFDLVGLCGGGGMH